BatatasLM-SP5-20L_prom_300

Model Description

BatatasLM fine-tuned model for the prom_300 DNA sequence classification task.

Base Model

Base model: BatatasLM-SP5-20L_pretrain

Task

Promoter sequence classification using 300 bp sequence windows.

Input

DNA sequence text using the tokenizer included in this repository.

Output

Sequence-classification logits for labels declared in config.json. Test predictions and training metrics are not included.

Intended Use

Research and benchmarking of DNA sequence functional classification.

Model Files

config.json, pytorch_model.bin, tokenizer files, and custom Python modules required by auto_map.

Loading

from transformers import AutoModelForSequenceClassification
model = AutoModelForSequenceClassification.from_pretrained("BatatasLM-SP5-20L_prom_300", trust_remote_code=True)

Citation

BatatasLM: A Sweetpotato-Centric DNA Foundation Model.

Project Information

• Project: BatatasLM
• GitHub: https://github.com/Weiyiliang/BatatasLM
• Institution: Jiangsu Normal University

Contact

Yiliang Wei - weiyiliang.2013@tsinghua.org.cn